Sequence Ontology
- Prefix:
so - Kind: concept_scheme
License:CC-BY-SA-4.0- Namespace / website: http://purl.obolibrary.org/obo/SO_
- External catalog: open catalog entry
Coverage
- GMEOW source terms: 7
- Projection rows: 0
- Equivalence rows: 7
- Profiles: -
- Slices: places
How To Use This Target
Use native GMEOW terms as the authoring surface, then inspect the projection rows below to see which facts can leave GMEOW for this consumer vocabulary. Treat lossy notes as adoption warnings, not as implementation details.
Source Terms
| Term | Label | Slice |
|---|---|---|
gmeow:SequenceFeatureType |
Sequence Feature Type | places |
gmeow:sequenceFeatureTypeCDS |
coding sequence (CDS) | places |
gmeow:sequenceFeatureTypeChromosome |
chromosome | places |
gmeow:sequenceFeatureTypeExon |
exon | places |
gmeow:sequenceFeatureTypeGene |
gene | places |
gmeow:sequenceFeatureTypeIntron |
intron | places |
gmeow:sequenceFeatureTypeSNP |
single nucleotide polymorphism (SNP) | places |
Mapping Rows
| Source | Kind | Profile | Predicate/Relation | Target | Evidence |
|---|---|---|---|---|---|
gmeow:SequenceFeatureType |
equivalence | - |
skos:closeMatch | so:0000110 | gmeow-places.sssom.tsv; gmeow:eqPlaces174; confidence 0.9 |
gmeow:sequenceFeatureTypeCDS |
equivalence | - |
skos:exactMatch | so:0000316 | gmeow-places.sssom.tsv; gmeow:eqPlaces178; confidence 0.95 |
gmeow:sequenceFeatureTypeChromosome |
equivalence | - |
skos:exactMatch | so:0000340 | gmeow-places.sssom.tsv; gmeow:eqPlaces180; confidence 0.95 |
gmeow:sequenceFeatureTypeExon |
equivalence | - |
skos:exactMatch | so:0000147 | gmeow-places.sssom.tsv; gmeow:eqPlaces176; confidence 0.95 |
gmeow:sequenceFeatureTypeGene |
equivalence | - |
skos:exactMatch | so:0000704 | gmeow-places.sssom.tsv; gmeow:eqPlaces175; confidence 0.95 |
gmeow:sequenceFeatureTypeIntron |
equivalence | - |
skos:exactMatch | so:0000188 | gmeow-places.sssom.tsv; gmeow:eqPlaces177; confidence 0.95 |
gmeow:sequenceFeatureTypeSNP |
equivalence | - |
skos:exactMatch | so:0000694 | gmeow-places.sssom.tsv; gmeow:eqPlaces179; confidence 0.95 |