has sequence feature
- CURIE:
gmeow:hasSequenceFeature - IRI: https://blackcatinformatics.ca/gmeow/hasSequenceFeature
- Category: property
- Defined by:
gmeow:slices/places - Box roles: RBox role (What is this?)
Links a biological sequence location to a feature annotation on that sequence. Non-functional: a single location may carry multiple features (overlapping genes, nested exons, multiple SNPs).
Structure
Property shape: object property; gmeow:BiologicalSequenceLocation -> gmeow:SequenceFeature
Practical Pattern
Use gmeow:hasSequenceFeature from gmeow:BiologicalSequenceLocation to gmeow:SequenceFeature when the relationship itself belongs in the native GMEOW graph.
Common Companion Terms
gmeow:BiologicalSequenceLocation, gmeow:SequenceFeature
Usage Advice
Use when
- Use to link a biological sequence location to a feature annotation on it; non-functional, so overlapping/nested features coexist.
Avoid when
- Avoid attaching coordinates here (they live on the feature's
gmeow:hasSequenceCoordinates).
How to use
- Attach
gmeow:SequenceFeatureinstances viagmeow:hasSequenceFeature; each carries its own coordinates and type.
Examples
- ex:chr7
gmeow:hasSequenceFeatureex:brca1.